BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028C04SP1|AL428869
(877 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig761 1723 0.0
>3x_Contig761
Length = 2799
Score = 1723 bits (869), Expect = 0.0
Identities = 876/877 (99%), Gaps = 1/877 (0%)
Strand = Plus / Minus
Query: 1 ggatcgtcgtccaacaattcgaaagcccagtacccaattgggattctgacagtgttcaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1602 ggatcgtcgtccaacaattcgaaagcccagtacccaattgggattctgacagtgttcaac 1543
Query: 61 ccagtgttggaaatatcttcaaaatccgcttcagtgatccaagtggaccaatgctgtttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1542 ccagtgttggaaatatcttcaaaatccgcttcagtgatccaagtggaccaatgctgtttc 1483
Query: 121 aatctatcacgagcaaggtcttcgcccaaatattggcaataatggtactcatcgtatggg 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1482 aatctatcacgagcaag-tcttcgcccaaatattggcaataatggtactcatcgtatggg 1424
Query: 181 ataccgtcatcgttatactcattggtacggaacgtttcgaaaagcgatggggtaatgaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1423 ataccgtcatcgttatactcattggtacggaacgtttcgaaaagcgatggggtaatgaat 1364
Query: 241 ggttccaacaccaaccaaccaccaaggttcacacccctgactttataattctcatattca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1363 ggttccaacaccaaccaaccaccaaggttcacacccctgactttataattctcatattca 1304
Query: 301 aagtatctttttgaaagaggcaatggctgtgccagacacactgagaccagcaacgaaatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1303 aagtatctttttgaaagaggcaatggctgtgccagacacactgagaccagcaacgaaatc 1244
Query: 361 aatgaaacaacttgcattgaaagcattgcgtagtgaattttatatttatatgtatggccc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1243 aatgaaacaacttgcattgaaagcattgcgtagtgaattttatatttatatgtatggccc 1184
Query: 421 tttgtattcctctgatgtattggcaatatatgcaatatagttataggacagtgattgttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1183 tttgtattcctctgatgtattggcaatatatgcaatatagttataggacagtgattgttt 1124
Query: 481 tcacctcgatgacttttggacacagatacagttatcagtaacccttttctcgatatcaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1123 tcacctcgatgacttttggacacagatacagttatcagtaacccttttctcgatatcaga 1064
Query: 541 tcttaaatacagccagatcagaaaaaaagttatctcgaaacgaatgagtcgggaagcgtt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1063 tcttaaatacagccagatcagaaaaaaagttatctcgaaacgaatgagtcgggaagcgtt 1004
Query: 601 acaagtgaatctctaaacacctatttatatctattcacacttacaactgtaaactttcca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1003 acaagtgaatctctaaacacctatttatatctattcacacttacaactgtaaactttcca 944
Query: 661 caaacttggacagggtcagggtcagagatgaccaccgctccctcccaagtagcaacgtat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 943 caaacttggacagggtcagggtcagagatgaccaccgctccctcccaagtagcaacgtat 884
Query: 721 aaattgattctgacaaaacccgcgtcgctaaaaaaaaaatacgtaaccaaggtccttaga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 883 aaattgattctgacaaaacccgcgtcgctaaaaaaaaaatacgtaaccaaggtccttaga 824
Query: 781 cactgtgaatgggcaaaaaataaaccgaagctgcgtacgagtacaaacgtgtatattttt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 823 cactgtgaatgggcaaaaaataaaccgaagctgcgtacgagtacaaacgtgtatattttt 764
Query: 841 aaccactgaaaaaccatcgaaatcggttacaacaaaa 877
|||||||||||||||||||||||||||||||||||||
Sbjct: 763 aaccactgaaaaaccatcgaaatcggttacaacaaaa 727
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7555
Number of Sequences: 1807
Number of extensions: 7555
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 1
length of query: 877
length of database: 10,358,551
effective HSP length: 16
effective length of query: 861
effective length of database: 10,329,639
effective search space: 8893819179
effective search space used: 8893819179
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)